Connect with us

Fitness

Molecular characterization of human adenoviruses associated with pediatric respiratory infections in Karachi, Pakistan – BMC Infectious Diseases

Published

on

Molecular characterization of human adenoviruses associated with pediatric respiratory infections in Karachi, Pakistan – BMC Infectious Diseases

  • Ahmad S, Malik A, Ullah I, Badar N, Khan IN, Atlas A, Muhammad A, Khan MU. Prevalence of human adenovirus in paediatric patients presenting with acute respiratory symptoms at different hospitals of Pakistan. J Ayub Med Coll Abbottabad-Pakistan. 2023; 35(1).

  • Announcement of Results of 7th Population and Housing Census-. 2023 ‘The Digital Census’. https://www.pbs.gov.pk/, 2023.

  • Climate. and Average Weather Year Round in Karachi, Pakistan, Weather Spark, https://weatherspark.com/countries/PK.

  • Coleman KK, Wong CC, Jayakumar J, Nguyen TT, Wong AW, Yadana S, Thoon KC, Chan KP, Low JG, Kalimuddin S, Dehghan S. Adenoviral infections in Singapore: should new antiviral therapies and vaccines be adopted? J Infect Dis. 2020;221(4):566–77.

    CAS 
    PubMed 

    Google Scholar
     

  • Coleman KK, Robie ER, Abdelgadir A, Kozhumam AS, Binder RA, Gray GC. Six decades of human adenovirus type 4 infections reviewed: increasing infections among civilians are a matter of concern. Clin Infect Dis. 2021;73(4):740–6.

    Article 
    PubMed 

    Google Scholar
     

  • Das AV, Basu S. Epidemic keratoconjunctivitis in India: trend analysis and implications for viral outbreaks. Indian J Ophthalmol. 2020;68(5):732.

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Du Prel JB, Puppe W, Gröndahl B, Knuf M, Weigl F, Schaaff F, Schaaff F, Schmitt HJ. Are meteorological parameters associated with acute respiratory tract infections? Clin Infect Dis. 2009;49(6):861–8.

    Article 
    PubMed 

    Google Scholar
     

  • Ghebremedhin B. Human adenovirus: viral pathogen with increasing importance. Eur J Microbiol Immunol. 2014;4(1):26–33.

    Article 
    CAS 

    Google Scholar
     

  • Grand RJ. Pathogenicity and virulence of human adenovirus F41: possible links to severe hepatitis in children. Virulence. 2023;14(1):2242544.

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Haque E, Banik U, Monowar T, Anthony L, Adhikary AK. Worldwide increased prevalence of human adenovirus type 3 (HAdV-3) respiratory infections is well correlated with heterogeneous hypervariable regions (HVRs) of hexon. PLoS ONE. 2018;13(4):e0196263.

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Hong JY, Lee HJ, Piedra PA, Choi EH, Park KH, Koh YY, Kim WS. Lower respiratory tract infections due to adenovirus in hospitalized Korean children: epidemiology, clinical features, and prognosis. Clin Infect Dis. 2001;32(10):1423–9.

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Jabeen C, Mushtaq MH, Umbreen G. Risk factors of severe pneumonia among children: a hospital based case control study in Lahore, Pakistan. Prof Med J. 2021;28(10):1470–6.


    Google Scholar
     

  • Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol. 1980;16:111–20.

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Li Y, Zhou W, Zhao Y, Wang Y, Xie Z, Lou Y, Tan W. Molecular typing and epidemiology profiles of human adenovirus infection among pediatric patients with severe acute respiratory infection in China. PLoS ONE. 2015;10(4):e0123234.

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Liu T, Li Z, Zhang S, Song S, Julong W, Lin Y, Guo N, Xing C, Xu A, Bi Z, Wang X. Viral etiology of acute respiratory tract infections in hospitalized children and adults in Shandong Province, China. Virol J. 2015;12(1):1–7.

    Article 

    Google Scholar
     

  • Liu C, Xiao Y, Zhang J, Ren L, Li J, Xie Z, Xu B, Yang Y, Qian S, Wang J, Shen K. Adenovirus infection in children with acute lower respiratory tract infections in Beijing, China, 2007 to 2012. BMC Infect Dis. 2015a;15(1):1–9.

    Article 

    Google Scholar
     

  • Majumdar A, Saha R, Chatterjee A, Gupta R, Chaudhuri RD, Chakrabarti AK, Dutta S. Upsurge in hospitalization of pediatric patients with severe acute respiratory infections in Kolkata and surrounding districts caused by recombinant human respiratory adenovirus type B 7/3. J Med Virol. 2023;95(7):e28897.

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Naeem I, Siddiqi S, Siddiqui AR, Hasan R. Exploring stakeholders’ experiences and perceptions regarding barriers to effective surveillance of communicable diseases in a rural district of Pakistan: a qualitative study. BMJ Open 2022; 12(11).

  • Nanmoku K, Ishikawa N, Kurosawa A, Shimizu T, Kimura T, Miki A, Sakuma Y, Yagisawa T. Clinical characteristics and outcomes of adenovirus infection of the urinary tract after renal transplantation. Transpl Infect Disease. 2016;18(2):234–9.

    Article 
    CAS 

    Google Scholar
     

  • Naz R, Gul A, Javed U, Urooj A, Amin S, Fatima Z. Etiology of acute viral respiratory infections common in Pakistan: a review. Reviews Med Mirology. 2019;29(2):e2024.

    Article 

    Google Scholar
     

  • Price RH, Graham C, Ramalingam S. Association between viral seasonality and meteorological factors. Sci Rep. 2019;9(1):929.

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Rosete DP, Manjarrez ME, Barron BL. Adenoviruses C in non-hospitalized Mexican children older than five years of age with acute respiratory infection. Mem Inst Oswaldo Cruz. 2008;103:195–200.

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Sajed AN. Identification of pathogenic microorganisms in bronchial washings and their Antibiotic Sensitivity Profile. Lahore Garrison Univ J Life Sci. 2019;3(4):231–8.

    Article 

    Google Scholar
     

  • Shieh WJ. Human adenovirus infections in pediatric population-an update on clinico–pathologic correlation. Biomedical J. 2022;45(1):38–49.

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Spaeder MC, Stewart C, Sharron MP, Noether JR, Martinez-Schlurman N, Kavanagh RP, Signoff JK, McCrory MC, Eidman DB, Subbaswamy AV, Shea PL. Adenoviral respiratory infection-associated mortality in children: a retrospective case series. J Pediatr Intensive Care. 2022;11(01):013–8.

    Article 

    Google Scholar
     

  • Tamura K, Stecher G, Kumar S. MEGA11: molecular evolutionary genetics analysis version 11. Mol Biol Evol. 2021;38(7):3022–7.

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Ukuli QA, Erima B, Mubiru A, Atim G, Tugume T, Kibuuka H, Mworozi E, Ducatez MF, Wabwire-Mangen F, Byarugaba DK. Molecular characterisation of human adenoviruses associated with respiratory infections in Uganda. BMC Infect Dis. 2023;23(1):435.

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Wang X, Wang D, Umar S, Qin S, Ling Q, Gray GC, Liu Y. Molecular typing of human adenoviruses among hospitalized patients with respiratory tract infections in a tertiary hospital in Guangzhou, China between 2017 and 2019. BMC Infect Dis. 2021;21(1):748.

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Wang F, Zhu R, Qian Y, Sun Y, Chen D, Wang F, Zhou Y, Guo Q, Liu L, Xu Y, Cao L. The changed endemic pattern of human adenovirus from species B to C among pediatric patients under the pressure of non-pharmaceutical interventions against COVID-19 in Beijing, China. Virol J. 2023;20(1):4.

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Wu X, Zhang J, Lan W, Quan L, Ou J, Zhao W, Wu J, Woo PC, Seto D, Zhang Q. Molecular typing and rapid identification of human adenoviruses associated with respiratory diseases using universal PCR and sequencing primers for the three major capsid genes: Penton base, hexon, and fiber. Front Microbiol. 2022;13:911694.

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Xie L, Zhang B, Xiao N, Zhang F, Zhao X, Liu Q, Xie Z, Gao H, Duan Z, Zhong L. Epidemiology of human adenovirus infection in children hospitalized with lower respiratory tract infections in Hunan, China. J Med Virol. 2019;91(3):392–400.

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Xu D, Chen L, Wu X, Ji L. Molecular typing and epidemiology profiles of human adenovirus infection among hospitalized patients with severe acute respiratory infection in Huzhou, China. PLoS ONE. 2022;17(4):e0265987.

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Yao LH, Wang C, Wei TL, Wang H, Ma FL, Zheng LS. Human adenovirus among hospitalized children with respiratory tract infections in Beijing, China, 2017–2018. Virol J. 2019;16(1):1–8.

    Article 

    Google Scholar
     

  • Zhao H, Zhou M, Zheng Q, Lang G, Xu L. Immune status affects the clinical features and outcomes of adult patients with respiratory adenovirus infection. Epidemiol Infect. 2021;149:e235.

    Article 
    CAS 
    PubMed Central 

    Google Scholar
     

  • Continue Reading